Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-329 in SMCL Lung Bhattacharjee Cluster 9 Table contains all genes in the SMCL Lung Bhattacharjee cluster number 9. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-329 5754 PTK7 PTK7 protein tyrosine kinase 7 [Source:HGNC Symbol;Acc:9618] zzz999 463 ZFHX3 zinc finger homeobox 3 [Source:HGNC Symbol;Acc:777] zzz999 5357 PLS1 plastin 1 [Source:HGNC Symbol;Acc:9090] P 2770 GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 [Source:HGNC Symbol;Acc:4384] T 4613 MYCN v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) [Source:HGNC Symbol;Acc:7559] zzz999 83637 ZMIZ2 zinc finger, MIZ-type containing 2 [Source:HGNC Symbol;Acc:22229] zzz999 6499 SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae) [Source:HGNC Symbol;Acc:10898] zzz999 116138 KLHDC3 kelch domain containing 3 [Source:HGNC Symbol;Acc:20704] zzz999 22919 MAPRE1 microtubule-associated protein, RP/EB family, member 1 [Source:HGNC Symbol;Acc:6890] zzz999 10131 TRAP1 TNF receptor-associated protein 1 [Source:HGNC Symbol;Acc:16264] zzz999 1152 CKB creatine kinase, brain [Source:HGNC Symbol;Acc:1991] zzz999 7917 BAG6 BCL2-associated athanogene 6 [Source:HGNC Symbol;Acc:13919] zzz999 723790 HIST2H2AA4 histone cluster 2, H2aa4 [Source:HGNC Symbol;Acc:29668] zzz999 4947 OAZ2 ornithine decarboxylase antizyme 2 [Source:HGNC Symbol;Acc:8096] zzz999 22839 DLGAP4 discs, large (Drosophila) homolog-associated protein 4 [Source:HGNC Symbol;Acc:24476] P T 5518 PPP2R1A protein phosphatase 2, regulatory subunit A, alpha [Source:HGNC Symbol;Acc:9302] zzz999 11328 FKBP9 FK506 binding protein 9, 63 kDa [Source:HGNC Symbol;Acc:3725] zzz999 26576 SRPK3 SRSF protein kinase 3 [Source:HGNC Symbol;Acc:11402] zzz999 9899 SV2B synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:16874] zzz999 51755 CDK12 cyclin-dependent kinase 12 [Source:HGNC Symbol;Acc:24224] zzz999 55544 RBM38 RNA binding motif protein 38 [Source:HGNC Symbol;Acc:15818] zzz999 4320 MMP11 matrix metallopeptidase 11 (stromelysin 3) [Source:HGNC Symbol;Acc:7157] zzz999 5603 MAPK13 mitogen-activated protein kinase 13 [Source:HGNC Symbol;Acc:6875] zzz999 4745 NELL1 NEL-like 1 (chicken) [Source:HGNC Symbol;Acc:7750] zzz999 7249 TSC2 tuberous sclerosis 2 [Source:HGNC Symbol;Acc:12363] zzz999 3704 ITPA inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:HGNC Symbol;Acc:6176] zzz999 8910 SGCE sarcoglycan, epsilon [Source:HGNC Symbol;Acc:10808] zzz999 85236 HIST1H2BK histone cluster 1, H2bk [Source:HGNC Symbol;Acc:13954] zzz999 51760 SYT17 synaptotagmin XVII [Source:HGNC Symbol;Acc:24119] zzz999 1155 TBCB tubulin folding cofactor B [Source:HGNC Symbol;Acc:1989] zzz999 9289 GPR56 G protein-coupled receptor 56 [Source:HGNC Symbol;Acc:4512] zzz999 29 ABR active BCR-related gene [Source:HGNC Symbol;Acc:81] zzz999 293 SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:HGNC Symbol;Acc:10992] zzz999 23162 MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:6884] zzz999 7551 ZNF3 zinc finger protein 3 [Source:HGNC Symbol;Acc:13089] zzz999 4151 MB myoglobin [Source:HGNC Symbol;Acc:6915] zzz999 1917 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 [Source:HGNC Symbol;Acc:3192] zzz999 22874 PLEKHA6 pleckstrin homology domain containing, family A member 6 [Source:HGNC Symbol;Acc:17053] zzz999 6738 TROVE2 TROVE domain family, member 2 [Source:HGNC Symbol;Acc:11313] zzz999 2030 SLC29A1 solute carrier family 29 (nucleoside transporters), member 1 [Source:HGNC Symbol;Acc:11003] zzz999 381 ARF5 ADP-ribosylation factor 5 [Source:HGNC Symbol;Acc:658] zzz999 4720 NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7708] T 23174 ZCCHC14 zinc finger, CCHC domain containing 14 [Source:HGNC Symbol;Acc:24134] zzz999 11156 PTP4A3 protein tyrosine phosphatase type IVA, member 3 [Source:HGNC Symbol;Acc:9636] zzz999 226 ALDOA aldolase A, fructose-bisphosphate [Source:HGNC Symbol;Acc:414] zzz999 1832 DSP desmoplakin [Source:HGNC Symbol;Acc:3052] zzz999 1912 PHC2 polyhomeotic homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:3183] T 27113 BBC3 BCL2 binding component 3 [Source:HGNC Symbol;Acc:17868] zzz999 8349 HIST2H2BE histone cluster 2, H2be [Source:HGNC Symbol;Acc:4760] zzz999 23175 LPIN1 lipin 1 [Source:HGNC Symbol;Acc:13345] zzz999 2801 GOLGA2 golgin A2 [Source:HGNC Symbol;Acc:4425] zzz999 23608 MKRN1 makorin ring finger protein 1 [Source:HGNC Symbol;Acc:7112] P T 7392 USF2 upstream transcription factor 2, c-fos interacting [Source:HGNC Symbol;Acc:12594] P 9858 KIAA0649 KIAA0649 [Source:HGNC Symbol;Acc:29089] zzz999 3714 JAG2 jagged 2 [Source:HGNC Symbol;Acc:6189] zzz999 865 CBFB core-binding factor, beta subunit [Source:HGNC Symbol;Acc:1539] zzz999 51592 TRIM33 tripartite motif containing 33 [Source:HGNC Symbol;Acc:16290] P T 9762 zzz999 ProSAP-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O60299] zzz999 5066 PAM peptidylglycine alpha-amidating monooxygenase [Source:HGNC Symbol;Acc:8596] P 6204 RPS10 ribosomal protein S10 [Source:HGNC Symbol;Acc:10383] zzz999 6804 STX1A syntaxin 1A (brain) [Source:HGNC Symbol;Acc:11433] zzz999 780 DDR1 discoidin domain receptor tyrosine kinase 1 [Source:HGNC Symbol;Acc:2730] zzz999 587 BCAT2 branched chain amino-acid transaminase 2, mitochondrial [Source:HGNC Symbol;Acc:977] zzz999 9898 UBAP2L ubiquitin associated protein 2-like [Source:HGNC Symbol;Acc:29877] zzz999 638 BIK BCL2-interacting killer (apoptosis-inducing) [Source:HGNC Symbol;Acc:1051] zzz999 8346 HIST1H2BI histone cluster 1, H2bi [Source:HGNC Symbol;Acc:4756] zzz999 6293 VPS52 vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10518] zzz999 271 AMPD2 adenosine monophosphate deaminase 2 [Source:HGNC Symbol;Acc:469] zzz999 2886 GRB7 growth factor receptor-bound protein 7 [Source:HGNC Symbol;Acc:4567] zzz999 1365 CLDN3 claudin 3 [Source:HGNC Symbol;Acc:2045] zzz999 56255 TMX4 thioredoxin-related transmembrane protein 4 [Source:HGNC Symbol;Acc:25237] zzz999 11247 NXPH4 neurexophilin 4 [Source:HGNC Symbol;Acc:8078] zzz999 25844 YIPF3 Yip1 domain family, member 3 [Source:HGNC Symbol;Acc:21023] zzz999 6741 SSB Sjogren syndrome antigen B (autoantigen La) [Source:HGNC Symbol;Acc:11316] zzz999 9500 MAGED1 melanoma antigen family D, 1 [Source:HGNC Symbol;Acc:6813] zzz999 10904 BLCAP bladder cancer associated protein [Source:HGNC Symbol;Acc:1055] P 1114 CHGB chromogranin B (secretogranin 1) [Source:HGNC Symbol;Acc:1930] zzz999 5310 PKD1 polycystic kidney disease 1 (autosomal dominant) [Source:HGNC Symbol;Acc:9008] zzz999 2975 GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa [Source:HGNC Symbol;Acc:4664] zzz999 8342 HIST1H2BM histone cluster 1, H2bm [Source:HGNC Symbol;Acc:4750] zzz999 7936 RDBP RD RNA binding protein [Source:HGNC Symbol;Acc:13974] zzz999

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